<?xml version="1.0" encoding="ISO-8859-1"?><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<front>
<journal-meta>
<journal-id>1659-1321</journal-id>
<journal-title><![CDATA[Agronomía Mesoamericana]]></journal-title>
<abbrev-journal-title><![CDATA[Agron. Mesoam]]></abbrev-journal-title>
<issn>1659-1321</issn>
<publisher>
<publisher-name><![CDATA[Universidad de Costa Rica]]></publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id>S1659-13212024000100033</article-id>
<article-id pub-id-type="doi">10.15517/am.2024.57540</article-id>
<title-group>
<article-title xml:lang="es"><![CDATA[Expresión genética en Longissimus dorsi e hígado en dos etapas del crecimiento en cerdos]]></article-title>
<article-title xml:lang="en"><![CDATA[Gene expression in Longissimus dorsi and liver in two stages of growth in pigs]]></article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname><![CDATA[Lemus-Flores]]></surname>
<given-names><![CDATA[Clemente]]></given-names>
</name>
<xref ref-type="aff" rid="Aff"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname><![CDATA[Bugarín-Prado]]></surname>
<given-names><![CDATA[Job Oswaldo]]></given-names>
</name>
<xref ref-type="aff" rid="Aff"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname><![CDATA[Lemus-Avalos]]></surname>
<given-names><![CDATA[Gilberto]]></given-names>
</name>
<xref ref-type="aff" rid="Aff"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname><![CDATA[Loeza-Concha]]></surname>
<given-names><![CDATA[Henry]]></given-names>
</name>
<xref ref-type="aff" rid="Aff"/>
</contrib>
</contrib-group>
<aff id="Af1">
<institution><![CDATA[,Universidad Autónoma de Nayarit Unidad Académica de Medicina Veterinaria y Zootecnia ]]></institution>
<addr-line><![CDATA[Compostela Nayarit]]></addr-line>
<country>Mexico</country>
</aff>
<aff id="Af2">
<institution><![CDATA[,Universidad Autónoma de Nayarit Unidad Académica de Agricultura ]]></institution>
<addr-line><![CDATA[Xalisco Nayarit]]></addr-line>
<country>Mexico</country>
</aff>
<aff id="Af3">
<institution><![CDATA[,Universidad Autónoma de Nayarit Unidad Académica de Agricultura ]]></institution>
<addr-line><![CDATA[Xalisco Nayarit]]></addr-line>
<country>Mexico</country>
</aff>
<aff id="Af4">
<institution><![CDATA[,Colegio de Postgraduados Campus Campeche ]]></institution>
<addr-line><![CDATA[Champotón Campeche]]></addr-line>
<country>Mexico</country>
</aff>
<pub-date pub-type="pub">
<day>00</day>
<month>12</month>
<year>2024</year>
</pub-date>
<pub-date pub-type="epub">
<day>00</day>
<month>12</month>
<year>2024</year>
</pub-date>
<volume>35</volume>
<numero>1</numero>
<copyright-statement/>
<copyright-year/>
<self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_arttext&amp;pid=S1659-13212024000100033&amp;lng=en&amp;nrm=iso"></self-uri><self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_abstract&amp;pid=S1659-13212024000100033&amp;lng=en&amp;nrm=iso"></self-uri><self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_pdf&amp;pid=S1659-13212024000100033&amp;lng=en&amp;nrm=iso"></self-uri><abstract abstract-type="short" xml:lang="es"><p><![CDATA[Resumen  Introducción.  La expresión genética varía en relación con la etapa fisiológica del cerdo y es diferente en músculo e hígado. Objetivo. Identificar los genes con expresión genética diferencial en los procesos biológicos del cerdo en los tejidos Longissimus dorsi e hígado, por medio del análisis de transcriptoma, durante las etapas de crecimiento (55 ± 1,05 kg) y engorda final (101 ± 7,8 kg). Materiales y métodos. El estudio se realizó en la Unidad Académica de Agricultura de la Universidad Autónoma de Nayarit, México, durante la temporada primavera-verano del año 2019. Se consideraron doce muestras totales, tres de músculo Longissimus dorsi y tres de hígado por etapa, para la extracción de ARN y la secuenciación. Con el método DESeq2 se obtuvo diferencialmente la expresión génica de los Log2FC para los grupos crecimiento y engorda final en Longissimus dorsi e hígado, y se identificó la función biológica de los genes con expresión genética diferencial. Resultados. En el hígado se identificó la mayor cantidad de genes con expresión genética diferencial, así como en el cromosoma 6, tanto en Longissimus dorsi como en el hígado. En Longissimus dorsi del grupo de crecimiento, se expresaron los genes FUT1, SESN2 y FGF21, relacionados con el crecimiento. También se identificaron genes sin expresión, como NR4A3, PDK4, PER1 y PTPRO, los cuales están involucrados en procesos del sistema inmune y ritmo circadiano. En el hígado del grupo de crecimiento, se expresaron los genes IHH y MYL7, mientras que los genes MFSD2A, LIPG, THBS1, TGFB2, LTF y APOA4, sin expresión, se identificaron como los más asociados a procesos biológicos. Conclusiones. En Longissimus dorsi del grupo de crecimiento, los genes se relacionaron con el crecimiento, y en el grupo de engorda final, con inmunidad, crecimiento y calidad de la carne. En el hígado del grupo de crecimiento, los genes se asociaron con el crecimiento, y en el grupo de engorda final, con inmunidad, crecimiento, metabolismo de nutrientes y lípidos, lipoproteínas y detoxificación.]]></p></abstract>
<abstract abstract-type="short" xml:lang="en"><p><![CDATA[Abstract  Introduction.  Gene expression varies in relation to the physiological stage of the pig and the nutritional source, and that it differs between muscle and liver. Objective. To identify genes with differential gene expression in pig biological processes in Longissimus dorsi and liver tissues, by means of transcriptome analysis, during growth (55 ± 1.05 kg) and final fattening (101 ± 7.8 kg) stages. Materials and methods. The study was conducted at the Academic Unit of Agriculture of the Universidad Autónoma de Nayarit, Mexico, during the summer of 2019. A total of twelve samples were considered, three from Longissimus dorsi muscle and three from liver per stage, for RNA extraction and sequencing. With the DESeq2 method, the gene expression of the Log2FC was obtained differentially for the growth group vs. final fattening of Longissimus dorsi and liver, and the biological function of the differentially expressed genes was identified. Results. The largest number of genes with differential gene expression was identified in the liver and on chromosome 6 in both Longissimus dorsi and liver. In Longissimus dorsi from the growth group, the genes FUT1, SESN2 and FGF21, associated with growth, were identified with high expression. Genes with low expression, such as NR4A3, PDK4, PER1 and PTPRO, involved in immune system processes and circadian rhythm, were also identified. In the liver of the growth group, the genes IHH and MYL7 were identified with high expression, while genes with low expression, including MFSD2A, LIPG, THBS1, TGFB2, LTF and APOA4, were identified as those most involved in biological processes. Conclusions. In Longissimus dorsi of the growth group, the genes were related to growth, while in the final fattening group, they were associated with immunity, growth and meat quality. In the liver of the growth group, the genes were related to growth, whereas in the final fattening group, they were associated with immunity, growth, nutrient and lipid metabolism, lipoproteins and detoxification.]]></p></abstract>
<kwd-group>
<kwd lng="es"><![CDATA[cromosoma]]></kwd>
<kwd lng="es"><![CDATA[transcriptoma]]></kwd>
<kwd lng="es"><![CDATA[método DESeq2]]></kwd>
<kwd lng="en"><![CDATA[cromosome]]></kwd>
<kwd lng="en"><![CDATA[transcriptome]]></kwd>
<kwd lng="en"><![CDATA[DESeq2 method]]></kwd>
</kwd-group>
</article-meta>
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