<?xml version="1.0" encoding="ISO-8859-1"?><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<front>
<journal-meta>
<journal-id>0034-7744</journal-id>
<journal-title><![CDATA[Revista de Biología Tropical]]></journal-title>
<abbrev-journal-title><![CDATA[Rev. biol. trop]]></abbrev-journal-title>
<issn>0034-7744</issn>
<publisher>
<publisher-name><![CDATA[Universidad de Costa Rica]]></publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id>S0034-77442012000500005</article-id>
<title-group>
<article-title xml:lang="en"><![CDATA[Static measurements of the resilience of Caribbean coral populations]]></article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname><![CDATA[Bruckner]]></surname>
<given-names><![CDATA[Andrew W.]]></given-names>
</name>
</contrib>
</contrib-group>
<aff id="A01">
<institution><![CDATA[,Khaled bin Sultan Living Oceans Foundation  ]]></institution>
<addr-line><![CDATA[Landover MD]]></addr-line>
<country>USA</country>
</aff>
<pub-date pub-type="pub">
<day>00</day>
<month>03</month>
<year>2012</year>
</pub-date>
<pub-date pub-type="epub">
<day>00</day>
<month>03</month>
<year>2012</year>
</pub-date>
<volume>60</volume>
<fpage>39</fpage>
<lpage>57</lpage>
<copyright-statement/>
<copyright-year/>
<self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_arttext&amp;pid=S0034-77442012000500005&amp;lng=en&amp;nrm=iso"></self-uri><self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_abstract&amp;pid=S0034-77442012000500005&amp;lng=en&amp;nrm=iso"></self-uri><self-uri xlink:href="http://www.scielo.sa.cr/scielo.php?script=sci_pdf&amp;pid=S0034-77442012000500005&amp;lng=en&amp;nrm=iso"></self-uri><abstract abstract-type="short" xml:lang="en"><p><![CDATA[The progressive downward shift in dominance of key reef building corals, coupled with dramatic increases in macroalgae and other nuisance species, fields of unstable coral rubble ,loss of structural relief, and declines of major functional groups of fishes is a common occurrence throughout the Caribbean today. The incorporation of resilience principles into management is a proposed strategy to reverse this trend and ensure proper functioning of coral reefs under predicted scenarios of climate change, yet ecosystem processes and functions that underlie reef resilience are not fully understood. Rapid assessments using the Atlantic and Gulf Rapid Reef Assessment (AGRRA) and the IUCN Resilience Assessment protocol can provide baseline information on reef resilience. A key aspect of these surveys focuses on coral population dynamics, including measures of coral cover, size, partial and whole-colony mortality, condition, and recruitment. One challenge is that these represent static measures involving a single assessment. Without following individual corals over time, it is difficult to determine rates of survival and growth of recruits and adult colonies, and differentiation of juveniles from small remnants of older colonies may not be possible, especially when macroalgal cover is high. To address this limitation, corals assessed in Bonaire in July 2010 were subdivided into two categories: 1) colonies on the reef substrate; and 2) colonies colonizing dead corals and exposed skeletal surfaces of living corals. Coral populations in Bonaire exhibited many features indicative of high resilience, including high coral cover (often 30-50%), high levels of recruitment, and a large number of corals that settled on dead corals and survived to larger size-classes. Overall, the skeletal surfaces of 12 species of corals were colonized by 16 species of corals, with up to 12 settlers on each colony, most (67%) on M. annularis (complex) skeletons. Nevertheless, completely dead M. annularis colonies were common, survivors were frequently reduced in size and subdivided into smaller tissue remnants, and these species exhibited higher amounts of partial mortality than all other species. A notable absence of sexual recruits and juveniles of M. annularis illustrates a progressive shift away from a Montastraea dominated system. This shift, characterized by an increasing dominance of smaller, short-lived species such as Agaricia and Porites and a reduction in size of longer-lived massive corals, is occurring throughout the Caribbean. Monitoring of the survival of recruits is necessary to determine whether Caribbean reefs will retain the same function, structure, identity and feedbacks (key signs of resilience) if the losses of M. annularis (complex) continue at present levels. The rapid assessment protocol utilized here allows characterization of colony size structure, partial mortality, recruitment, and whether small corals represent surviving recruits that increased in size or larger (older) colonies that continue to shrink in size. This approach can help determine the history of a site and its resilience.]]></p></abstract>
<abstract abstract-type="short" xml:lang="es"><p><![CDATA[En la actualidad se está viendo en el Caribe un cambio en la composición de los corales constructores de arrecifes, aumento en la cobertura de macroalgas y otras especies, un aumento en áreas cubiertas por escombros de corales, y una pérdida de relieve. La incorporación de principios de resiliencia en el manejo es una estrategia propuesta para revertir esta tendencia y asegurar la sobrevivencia y el adecuado funcionamiento de los arrecifes de coral bajo escenarios previstos de cambio climático. Sin embargo, todavía quedan grandes vacíos en la comprensión de los factores que promueven la resiliencia. Evaluaciones rápidas realizadas con la metodología AGRRA (Atlantic and Gulf Rapid Reef Assessment) y con el protocolo de Evaluación de Resiliencia para arrecifes coralinos de la IUCN brindan información de línea base sobre la resiliencia de los arrecifes del Caribe. Un aspecto clave de estos estudios se centra en la dinámica de las poblaciones de los corales, incluyendo medidas de cobertura de coral, estructura de tallas, la extensión de la mortalidad parcial y total de toda la comunidad, condición de los corales y reclutamiento. Un reto es que esto representa una medida estática que involucra una única evaluación. Sin seguir las colonias individuales y el reclutamiento en el tiempo, es difícil determinar las tasas de sobrevivencia y crecimiento de los reclutas, y podría no ser posible la diferenciación de los juveniles de los restos pequeños de colonias más viejas, especialmente cuando la cobertura algal es alta. Para abordar esta limitación, los corales monitoreados en Bonaire en julio del 2010 fueron subdivididos en dos categorías: 1) colonias sobre la estructura arrecifal; y 2) colonias creciendo sobre coral muerto o sobre las superficies expuestas del esqueleto de los corales vivos. Los arrecifes en Bonaire exhiben muchas características indicativas de alta resiliencia, incluyendo una alta cobertura de coral (frecuentemente 30-50%), altos niveles de reclutamiento, y un gran número de corales que se asentaron sobre los corales muertos y crecieron. En general, las superficies del esqueleto de 12 especies de corales fueron colonizadas por 16 especies de corales, con un máximo de 12 colonizadores en cada colonia, la mayoría (67%) sobre esqueletos de Montastraea annularis (complejo). Colonias completamente muertas de M. annularis fueron comunes y los sobrevivientes con frecuencia son más pequeños o subdivididos en pequeños restos de tejido. Montastraea annularis es la especie que exhibe una mayor mortalidad parcial en relación con los demás corales. Una notable ausencia de reclutamiento sexual y juveniles de M. annularis ilustra el cambio progresivo de cambio de un sistema dominado por Montastraea. Este cambio, que se está produciendo en todo el Caribe, se caracteriza por un dominio cada vez mayor de especies más pequeñas y de vida corta como Agaricia y Porites, y una reducción en el tamaño de los corales masivos longevos. El seguimiento de la sobrevivencia de los reclutas es necesario para determinar si los arrecifes del Caribe mantendrán la misma función, estructura, identidad y retroalimentación (signos clave de la resiliencia), y si las pérdidas de M. annularis (complejo) continuarán a los niveles actuales. La evaluación rápida presentada aquí posibilita caracterizar la estructura de tamaño de las colonias, los niveles de reclutamiento y determinar si los corales pequeños representan sobrevivientes de colonias que incrementan su tamaño o colonias grandes (más viejas) que siguen disminuyendo de tamaño. Este enfoque puede ayudar a determinar la historia de un sitio y su capacidad de recuperación.]]></p></abstract>
<kwd-group>
<kwd lng="en"><![CDATA[resilience]]></kwd>
<kwd lng="en"><![CDATA[coral size structure]]></kwd>
<kwd lng="en"><![CDATA[coral recruitment]]></kwd>
<kwd lng="en"><![CDATA[survival and growth]]></kwd>
<kwd lng="en"><![CDATA[coral monitoring and assessment]]></kwd>
<kwd lng="es"><![CDATA[resiliencia]]></kwd>
<kwd lng="es"><![CDATA[estructura en la talla del coral]]></kwd>
<kwd lng="es"><![CDATA[reclutamiento de coral]]></kwd>
<kwd lng="es"><![CDATA[sobrevivencia y crecimiento]]></kwd>
<kwd lng="es"><![CDATA[monitoreo de corales]]></kwd>
<kwd lng="es"><![CDATA[evaluación de corales]]></kwd>
</kwd-group>
</article-meta>
</front><body><![CDATA[ <div style="text-align: justify;">     <div style="text-align: center;"><font size="4"><span  style="font-weight: bold; font-family: verdana;">Static measurements of the resilience of Caribbean coral populations</span></font><br  style="font-family: verdana;"> </div> <br style="font-family: verdana;">     <div style="text-align: center;"><font size="2"><span  style="font-family: verdana;">Andrew W. Bruckner<sup><a href="#1">1</a><a  name="2"></a>*</sup></span></font><br style="font-family: verdana;"> </div> <font size="2"><span style="font-family: verdana;">    <br>     <a name="Correspondencia2"></a>*<a href="#Correspondencia1">Direcci&oacute;n     para correspondencia</a></span></font><br style="font-family: verdana;">     <hr style="width: 100%; height: 2px;"><br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Abstract</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     ]]></body>
<body><![CDATA[<font size="2"><span style="font-family: verdana;">The progressive     downward shift in     dominance of key reef building corals, coupled with dramatic increases     in macroalgae and other nuisance species, fields of unstable coral     rubble ,loss of structural relief, and declines of major functional     groups of fishes is a common occurrence throughout the Caribbean today.     The incorporation of resilience principles into management is a     proposed strategy to reverse this trend and ensure proper functioning     of coral reefs under predicted scenarios of climate change, yet     ecosystem processes and functions that underlie reef resilience are not     ]]></body>
<body><![CDATA[fully understood. Rapid assessments using the Atlantic and Gulf Rapid     Reef Assessment (AGRRA) and the IUCN Resilience Assessment protocol can     provide baseline information on reef resilience. A key aspect of these     surveys focuses on coral population dynamics, including measures of     coral cover, size, partial and whole-colony mortality, condition, and     recruitment. One challenge is that these represent static measures     involving a single assessment. Without following individual corals over     time, it is difficult to determine rates of survival and growth of     recruits and adult colonies, and differentiation of juveniles from     small remnants of older colonies may not be possible, especially when     ]]></body>
<body><![CDATA[macroalgal cover is high. To address this limitation, corals assessed     in Bonaire in July 2010 were subdivided into two categories: 1)     colonies on the reef substrate; and 2) colonies colonizing dead corals     and exposed skeletal surfaces of living corals. Coral populations in     Bonaire exhibited many features indicative of high resilience,     including high coral cover (often 30-50%), high levels of recruitment,     and a large number of corals that settled on dead corals and survived     to larger size-classes. Overall, the skeletal surfaces of 12 species of     corals were colonized by 16 species of corals, with up to 12 settlers     on each colony, most (67%) on <span style="font-style: italic;">M.     ]]></body>
<body><![CDATA[annularis</span> (complex) skeletons.     Nevertheless, completely dead <span style="font-style: italic;">M.     annularis</span> colonies were common,     survivors were frequently reduced in size and subdivided into smaller     tissue remnants, and these species exhibited higher amounts of partial     mortality than all other species. A notable absence of sexual recruits     and juveniles of <span style="font-style: italic;">M. annularis</span>     illustrates a progressive shift away from     a <span style="font-style: italic;">Montastraea</span> dominated     system. This shift, characterized by an     ]]></body>
<body><![CDATA[increasing dominance of smaller, short-lived species such as <span      style="font-style: italic;">Agaricia</span>     and <span style="font-style: italic;">Porites</span> and a reduction     in size of longer-lived massive corals, is     occurring throughout the Caribbean. Monitoring of the survival of     recruits is necessary to determine whether Caribbean reefs will retain     the same function, structure, identity and feedbacks (key signs of     resilience) if the losses of <span style="font-style: italic;">M.     annularis</span> (complex) continue at present     levels. The rapid assessment protocol utilized here allows     ]]></body>
<body><![CDATA[characterization of colony size structure, partial mortality,     recruitment, and whether small corals represent surviving recruits that     increased in size or larger (older) colonies that continue to shrink in     size. This approach can help determine the history of a site and its     resilience. </span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Key     words:</span><span style="font-family: verdana;"> resilience, coral     size structure, coral     recruitment, survival and growth, coral monitoring and assessment.</span></font><br     ]]></body>
<body><![CDATA[ style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Resumen</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">En la actualidad se     est&aacute;     viendo en el Caribe un cambio en la composici&oacute;n de los corales     constructores de arrecifes, aumento en la cobertura de macroalgas y     otras especies, un aumento en &aacute;reas cubiertas por escombros de     ]]></body>
<body><![CDATA[corales, y una p&eacute;rdida de relieve. La incorporaci&oacute;n de     principios de resiliencia en el manejo es una estrategia propuesta para     revertir esta tendencia y asegurar la sobrevivencia y el adecuado     funcionamiento de los arrecifes de coral bajo escenarios previstos de     cambio clim&aacute;tico. Sin embargo, todav&iacute;a quedan grandes     vac&iacute;os en la comprensi&oacute;n de los factores que promueven la     resiliencia. Evaluaciones r&aacute;pidas realizadas con la     metodolog&iacute;a AGRRA (Atlantic and Gulf Rapid Reef Assessment) y     con el protocolo de Evaluaci&oacute;n de Resiliencia para arrecifes     coralinos de la IUCN brindan informaci&oacute;n de l&iacute;nea base     ]]></body>
<body><![CDATA[sobre la resiliencia de los arrecifes del Caribe. Un aspecto clave de     estos estudios se centra en la din&aacute;mica de las poblaciones de     los corales, incluyendo medidas de cobertura de coral, estructura de     tallas, la extensi&oacute;n de la mortalidad parcial y total de toda la     comunidad, condici&oacute;n de los corales y reclutamiento. Un reto es     que esto representa una medida est&aacute;tica que involucra una     &uacute;nica evaluaci&oacute;n. Sin seguir las colonias individuales y     el reclutamiento en el tiempo, es dif&iacute;cil determinar las tasas     de sobrevivencia y crecimiento de los reclutas, y podr&iacute;a no ser     posible la diferenciaci&oacute;n de los juveniles de los restos     ]]></body>
<body><![CDATA[peque&ntilde;os de colonias m&aacute;s viejas, especialmente cuando la     cobertura algal es alta. Para abordar esta limitaci&oacute;n, los     corales monitoreados en Bonaire en julio del 2010 fueron subdivididos     en dos categor&iacute;as: 1) colonias sobre la estructura arrecifal; y     2) colonias creciendo sobre coral muerto o sobre las superficies     expuestas del esqueleto de los corales vivos. Los arrecifes en Bonaire     exhiben muchas caracter&iacute;sticas indicativas de alta resiliencia,     incluyendo una alta cobertura de coral (frecuentemente 30-50%), altos     niveles de reclutamiento, y un gran n&uacute;mero de corales que se     asentaron sobre los corales muertos y crecieron. En general, las     ]]></body>
<body><![CDATA[superficies del esqueleto de 12 especies de corales fueron colonizadas     por 16 especies de corales, con un m&aacute;ximo de 12 colonizadores en     cada colonia, la mayor&iacute;a (67%) sobre esqueletos de <span      style="font-style: italic;">Montastraea</span>     annularis (complejo). Colonias completamente muertas de <span      style="font-style: italic;">M. annularis</span>     fueron comunes y los sobrevivientes con frecuencia son m&aacute;s     peque&ntilde;os o subdivididos en peque&ntilde;os restos de tejido.     <span style="font-style: italic;">Montastraea</span> annularis es la     especie que exhibe una mayor mortalidad     ]]></body>
<body><![CDATA[parcial en relaci&oacute;n con los dem&aacute;s corales. Una notable     ausencia de reclutamiento sexual y juveniles de <span      style="font-style: italic;">M. annularis</span> ilustra el     cambio progresivo de cambio de un sistema dominado por <span      style="font-style: italic;">Montastraea</span>.     Este cambio, que se est&aacute; produciendo en todo el Caribe, se     caracteriza por un dominio cada vez mayor de especies m&aacute;s     peque&ntilde;as y de vida corta como <span style="font-style: italic;">Agaricia</span>     y <span style="font-style: italic;">Porites</span>, y una     reducci&oacute;n en el tama&ntilde;o de los corales masivos longevos.     ]]></body>
<body><![CDATA[El seguimiento de la sobrevivencia de los reclutas es necesario para     determinar si los arrecifes del Caribe mantendr&aacute;n la misma     funci&oacute;n, estructura, identidad y retroalimentaci&oacute;n     (signos clave de la resiliencia), y si las p&eacute;rdidas de <span      style="font-style: italic;">M.     annularis</span> (complejo) continuar&aacute;n a los niveles actuales.     La     evaluaci&oacute;n r&aacute;pida presentada aqu&iacute; posibilita     caracterizar la estructura de tama&ntilde;o de las colonias, los     niveles de reclutamiento y determinar si los corales peque&ntilde;os     ]]></body>
<body><![CDATA[representan sobrevivientes de colonias que incrementan su tama&ntilde;o     o colonias grandes (m&aacute;s viejas) que siguen disminuyendo de     tama&ntilde;o. Este enfoque puede ayudar a determinar la historia de un     sitio y su capacidad de recuperaci&oacute;n.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Palabras     clave:</span><span style="font-family: verdana;"> resiliencia,     estructura en la talla del     coral, reclutamiento de coral, sobrevivencia y crecimiento, monitoreo     ]]></body>
<body><![CDATA[de corales, evaluaci&oacute;n de corales</span></font><br      style="font-family: verdana;">     <hr style="width: 100%; height: 2px;"><br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Until the late     1970s, benthic     substrates on Caribbean reefs were occupied primarily by reef-building     corals, with 50-80% benthic cover by living corals. Coral reefs     exhibited a generalized zonation pattern with elkhorn coral (<span      style="font-style: italic;">Acropora     palmata</span>) forming large, monospecific stands in the reef crest     ]]></body>
<body><![CDATA[and     shallow fore reef (0-5 m depth); stands of staghorn coral (<span      style="font-style: italic;">A.     cervicornis</span>) at intermediate depths (5-25 m depth) on wave     exposed     reefs and in shallow, protected environments; massive corals (dominated     by <span style="font-style: italic;">Montastraea</span> annularis     complex) throughout the fore reef (5-30 m     depth) and in back reef and lagoonal areas; and plating agaricids near     the base of the reef (20-40 m depth) (Goreau 1959). Coral cover has     ]]></body>
<body><![CDATA[plummeted on Caribbean reefs primarily due to the near total demise of     branching acroporids during the 1990s (Aronson &amp; Precht 2001,     Aronson <span style="font-style: italic;">et al</span>. 2002, Bruckner     2003, Gardner <span style="font-style: italic;">et al.</span> 2003),     which is now     being followed by massive losses of <span style="font-style: italic;">Montastraea</span>     annularis (complex)     (Bruckner &amp; Bruckner 2003, 2006a,b, Edmunds &amp; Elahi 2007,     Bruckner &amp; Hill 2009). </span></font><br      style="font-family: verdana;">     ]]></body>
<body><![CDATA[<br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Changes to Caribbean     reefs,     attributed largely to coral diseases, hurricanes, mass mortality of the     herbivorous long-spined sea urchin (<span style="font-style: italic;">Diadema     antillarum</span>), localized     human impacts, recent bleaching events and climate change (Lessio 1988,     Carpenter 1990, Sutherland 2004, Weil 2004,Grimsdith &amp; Salm 2006)     have manifested as dramatic phase shifts characterized by a dominance     of macroalgae and other nuisance species, fields of unstable coral     ]]></body>
<body><![CDATA[rubble, loss of three dimensional structure, and increases in abundance     of shorter-lived brooding corals such as <span      style="font-style: italic;">Agaricia</span> and <span      style="font-style: italic;">Porites</span> (Hughes     1994, Edmunds &amp; Carpenter 2001). Many of these stressors have     cumulative negative impacts on coral reef ecosystem health and are     integrally linked. For example, the virulence and severity of diseases     is elevated during and immediately following bleaching events and other     periods of elevated environmental stress (Bruno <span      style="font-style: italic;">et al.</span> 2007, Ballantine     ]]></body>
<body><![CDATA[<span style="font-style: italic;">et al.</span> 2008, Muller <span      style="font-style: italic;">et al.</span> 2008, Rogers <span      style="font-style: italic;">et al.</span> 2008, Bruckner &amp;     Hill 2009). Other human impacts such as overfishing of groupers,     snappers, parrotfish, lobster and other species can have cascading     impacts on ecosystem health by removing keystone species that are     critical in controlling harmful algae, corallivores and other pests     (Jackson <span style="font-style: italic;">et al.</span> 2001, Mumby     2006, Green &amp; Bellwood 2009). These     &#8220;pest&#8221; species compromise remaining corals through direct competition     ]]></body>
<body><![CDATA[and overgrowth, and may prevent recruitment of coral larvae and     regrowth of damaged corals.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Although many of the     threats     affecting coral reefs have been examined in detail since the early     1990s, very few studies have identified a single direct cause of these     impacts (a &#8220;smoking gun&#8221;), or site-specific remedies or treatments for     particular problems. Conversely, there has been a proliferation of     ]]></body>
<body><![CDATA[publications and reports presenting broad scale recommendations on the     need to address destructive human activities such as pollution and     overfishing, and the benefits associated with the establishment of     marine protected areas (Folke <span style="font-style: italic;">et al.</span>     1996, Roberts 1997, Roberts <span style="font-style: italic;">et al.</span>     2001, Hughes <span style="font-style: italic;">et al.</span> 2003,     2005, Almany et al 2007, 2009, Jones <span style="font-style: italic;">et     al.</span>     2009,.. There is good evidence that reduced fishing pressure, and in     particular the protection of herbivorous fish populations, can prevent     ]]></body>
<body><![CDATA[trophic cascades and coral-algal phase shifts (Mumby 2006, Mumby <span      style="font-style: italic;">et al.</span>     2006). Furthermore, restoration of certain keystone invertebrates, such     as <span style="font-style: italic;">Diadema antillarum</span>, and     increases in density of large herbivorous     fishes can trigger a reversal from a macroalgal dominated state and     promote coral recruitment (Edmunds &amp; Carpenter 2001, Carpenter     &amp; Edmunds 2006, Hughes <span style="font-style: italic;">et al.</span>     2009, Norstrom <span style="font-style: italic;">et al.</span> 2009).     As     ]]></body>
<body><![CDATA[climate change poses a growing threat to the persistence of these     ecosystems, it is imperative that these efforts are scaled up, as     degradation is outpacing the potential for recovery in absence of     management interventions.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Over the last     decade, research     efforts have placed a greater emphasis on examining coral reef health     and resilience, with a goal to identify strategies to enhance the     resilience of these ecosystems (Hughes <span     ]]></body>
<body><![CDATA[ style="font-style: italic;">et al.</span> 2003, 2005). <span      style="font-style: italic;">Ecological     Resilience</span> is a term which describes the capacity of a system to     absorb, resist or recover from disturbance or to adapt to change, while     continuing to maintain essential functions, structure, identity and     feedbacks (Hollings 1973, Nystrom &amp; Folke 2001, Nystrom <span      style="font-style: italic;">et al.</span>     2008, Obura &amp; Grimsditch 2009). There is considerable evidence that     sites with chronic human impacts are the least likely to resist     mortality and subsequently recover from acute large-scale events, but     ]]></body>
<body><![CDATA[by addressing these human impacts, they may be better able to cope with     acute events such as climate change and recover from both natural and     anthropogenic impacts (Jennings &amp; Kaiser 1998, Worm <span      style="font-style: italic;">et al.</span> 2006,     Knowlton &amp; Jackson 2008). MPAs, when properly designed and enforced     may help promote resilience to disturbances by increasing or     maintaining key ecosystem parameters such as fish biomass and coral     cover, and help maintain critical ecosystem processes and functions     (Cote <span style="font-style: italic;">et al.</span> 2001, Halpern     2003). However, in some cases MPAs may not     ]]></body>
<body><![CDATA[produce tangible conservation benefits, and they are often not accepted     by resource users (McClanahan <span style="font-style: italic;">et al.</span>     2006), emphasizing the need for     alternate management strategies. While great strides have been made in     understanding interrelationships among corals, fishes, and algae and     the role of certain functional groups in enhancing the health of coral     reef ecosystems, large gaps remain in our understanding of the dynamic     and complex processes that promote or undermine resilience (Hughes <span      style="font-style: italic;">et     al.</span> 2005).</span></font><br style="font-family: verdana;">     ]]></body>
<body><![CDATA[<br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">A detailed     assessment of resilience     relates to the entire scope of positive and negative factors affecting     the ecosystem. This includes ecological, environmental and physical     factors as well as social factors such as patterns of resource uses and     extraction, type and extent of pollution, presence of invasive species,     governance structures, economics, and effectiveness of existing     conservation and management efforts (Hughes <span      style="font-style: italic;">et al.</span> 2005). Quantitative     ]]></body>
<body><![CDATA[ecological indicators of resilience, that can be measured include: 1)     functional group abundance, species diversity and community redundancy,     with emphasis on corals, algae, large motile invertebrates and fish     communities; 2) the ecological interactions that drive dynamics within     and among these groups; 3) habitat and environmental influences that     directly affect reef associated organisms and interactions between     them; and 4) external drivers of change, including anthropogenic and     climate factors, and the level of connectivity with other reefs, (Cowen     <span style="font-style: italic;">et al.</span> 2006, Lindsey &amp;     Bruno 2008, Nystrom <span style="font-style: italic;">et al.</span>     ]]></body>
<body><![CDATA[2008, Green &amp;     Bellwood 2009, Obura &amp; Grimsditch 2009). </span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The Atlantic and     Gulf Rapid Reef     Assessment (AGRRA) and the IUCN Resilience Assessment protocols (Obura     &amp; Grimsdith 2009, Lang <span style="font-style: italic;">et al.</span>     2010) are two different rapid     ecological assessment approaches that can provide an indication of the     ]]></body>
<body><![CDATA[<span style="font-style: italic;">ecological resilience</span> of a     coral reef. Both of these share common     attributes, and they highlight the importance of the inclusion of     ecologically relevant fishes, algal functional group biomass/cover, and     coral population structure in rapid assessments. The IUCN protocol     includes other measures as well, such as a qualitative assessment of     various ecological and biological factors as well as physical factors     that promote resilience through shading, screening, cooling and     enhanced stress tolerance (Obura &amp; Grimsditch 2009). A detailed     resilience assessment also includes characterization of reef processes,     ]]></body>
<body><![CDATA[such as complex food-web interactions (e.g. herbivory, trophic     cascades) reproductive cycles, population connectivity, and coral and     fish recruitment, as well as examination of biological characteristics     (e.g. genetics of corals and zooxanthellae, symbiont performance, and     coral species susceptibility to bleaching, diseases and other     stressors).</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Because     comprehensive measurements     of resilience, incorporating the parameters described above and others,     ]]></body>
<body><![CDATA[are not possible using a single rapid assessment, this study     focused&nbsp;&nbsp; solely on one aspect of resilience, coral     population dynamics. The approach represents a hybrid between the AGGRA     and IUCN protocols, with a few modifications. Detailed measures of     colony size (length, width and height) were taken for each coral, along     with an estimate of the extent of partial colony mortality. This     prevents a potential underestimation of the original colony size that     would occur if only the live portion is considered when classifying     coral size. The number and diversity of recruits and juveniles     (colonies &lt; 4 cm diameter) are also recorded. Recruitment is often     ]]></body>
<body><![CDATA[considered an indicator of resilience (i.e. signs of recovery following     chronic or acute disturbances) (Mumby &amp; Harborne 2010). However,     without following recruits over time it is difficult to determine     survival rates of these recruits, or whether they are contributing to     population recovery. Survival of recruits, and growth to larger     size-classes was assessed by distinguishing between colonies on the     reef substrate and those found on exposed skeletal surfaces of other     corals; the latter represents both recruits and surviving juveniles.     This method was tested in July 2010 in Bonaire, and the results of     these assessments are presented here.</span></font><br     ]]></body>
<body><![CDATA[ style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Materials     and     Methods</span></font><br      style="font-weight: bold; font-family: verdana;">     <br style="font-weight: bold; font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Study     site:</span><span style="font-family: verdana;"> In July 2011, the     Living Ocean     ]]></body>
<body><![CDATA[Foundation conducted rapid assessments on 24 sites off the leeward side     of Bonaire and the adjacent Klein Bonaire, targeting <span      style="font-style: italic;">Montastraea</span>     dominated reefs from 5-15 m depth. All of these sites are fringing     reefs that begin close shore and drop to deeper water within a few     hundred meters. Many of the areas above 5 m depth were badly damaged by     recent hurricanes and are largely devoid of corals, but much of the     <span style="font-style: italic;">Montastraea</span> structure at mid     depths is still intact. The sites were     grouped into 3 distinct areas: a) sites north of Kralendijk located off     ]]></body>
<body><![CDATA[a rocky coastline; b) sites off the small offshore Klein Bonaire; and     c) sites south of Kralendijk located off a sand and low relief     limestone shoreline, many of which have a double reef system (<a      href="/img/revistas/rbt/v60s1/a05i1.jpg">Fig. 1</a>,     <a href="/img/revistas/rbt/v60s1/a05t1.gif">Table 1</a>).    <br>     <br style="font-family: verdana;">     </span></font>     <font size="2"><span style="font-weight: bold; font-family: verdana;">Assessment     protocol:</span><span style="font-family: verdana;"> The resilience     ]]></body>
<body><![CDATA[assessments conducted in Bonaire include measures of corals, fish,     algae and motile invertebrates through application of attributes of the     Atlantic and Gulf Rapid Reef Assessment (AGRRA) protocol, the IUCN     bleaching resilience protocol, and several additions. Data were     collected using a combination of belt transects, point intercept     methods and photographic documentation. While numerous biological,     ecological, physical and social measures must be analyzed concurrently     to gain a full picture of coral reef resilience, this manuscript     focuses specifically on one aspect of resilience (coral population     resilience) evaluated through a static measure of coral population     ]]></body>
<body><![CDATA[dynamics. Seven parameters were recorded for corals: 1) benthic cover;     2) coral diversity and abundance (by species); 3) coral size class     distributions (by species) and size of tissue remnants; 4) amount of     partial mortality and number of tissue remnants; 5) recruitment; 6)     location of settlement of recruits; and 7) coral condition. Belt     transects, each 10 m long and 1 m wide (minimum of three per reef),     were extended parallel to depth gradients on each reef. Within this     belt, each coral 4 cm or larger in diameter was identified to species,     measured and assessed for condition. A one meter bar, marked in 1 cm     increments was used to measure the maximum diameter, width     ]]></body>
<body><![CDATA[(perpendicular to the diameter), height, and amount of mortality.     Mortality was divided into three categories: recent, transitional and     old.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Benthic     cover: </span><span style="font-family: verdana;">Cover of substrate     and benthic organisms     (algae and invertebrates) was estimated using a point intercept method.     At each site, a minimum of six 10 meter long transects were deployed.     The organism and substrate type was recorded every ten cm for a total     ]]></body>
<body><![CDATA[of 100 points per transect. Substrates were identified as pavement,     rubble, sand/silt, dead coral and live coral. All corals were     identified to species. Other invertebrates were subdivided into phylum     or class and growth form or identified to genus/species when possible.     Algae were divided into five functional groups (fleshy macroalgae,     erect coralline algae, crustose coralline algae, turf algae,     cyanobacteria) with certain nuisance species recorded to genus (e.g.     <span style="font-style: italic;">Microdictyon, Lobophora, Dictyota,     Stypopodium, Peyssonnelia</span>). Key     invertebrates that also may become nuisance species recorded to genus     ]]></body>
<body><![CDATA[or higher taxonomic level included: tunicate (<span      style="font-style: italic;">Trididemnum</span>), encrusting     gorgonian (<span style="font-style: italic;">Erythropodium, Briareum</span>),     colonial anemone (<span style="font-style: italic;">Palythoa</span>),     encrusting or bioeroding sponge (<span style="font-style: italic;">Cliona     langae/aprica complex, Cliona     delitrix, Anthosigmella</span>), and hydrozoan coral (<span      style="font-style: italic;">Millepora</span>).</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     ]]></body>
<body><![CDATA[<font size="2"><span style="font-weight: bold; font-family: verdana;">Recruitment:</span><span      style="font-family: verdana;"> Sampling for corals smaller than 4 cm     was done using a minimum of five 0.25m<sup>2</sup> quadrats per     transect. Each     quadrat located at fixed, predetermined intervals (e.g. 2, 4, 6, 8, 10     m), alternating between right and left side of the transect. Recruits     were identified in both point intercept surveys and belt transects.     These corals were divided into recruits (0-2 cm diameter) and juveniles     (2.1-3.9 cm).</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     ]]></body>
<body><![CDATA[<font size="2"><span style="font-weight: bold; font-family: verdana;">Corals     colonizing skeletons of other corals:</span><span      style="font-family: verdana;"> All corals settling on skeletal     surfaces of other colonies (completely dead corals and corals with     partial mortality) within each belt transect were identified and     recorded separately from those corals occurring on reef substrates. For     each of these colonies, measurements were taken of the size (length,     width and height for colonies 4 cm or larger; maximum diameter for     corals that were 0-3.9 cm), and an estimate of percent mortality made     for those exhibiting partial mortality.</span></font><br     ]]></body>
<body><![CDATA[ style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Condition     of     corals</span><span style="font-family: verdana;">: Visual estimates of     tissue loss, using a 1 m bar marked in 1 cm increments, was recorded     for each colony over 4 cm in diameter. If the coral exhibits recent     tissue loss, the amount of remaining tissue, the percent that recently     died and the percent that died long ago were estimated for the entire     colony surface. Tissue loss was categorized as recent mortality     ]]></body>
<body><![CDATA[(occurring within the last 1-5 days), transitional mortality     (filamentous green algae and diatom colonization, 6-30 days) and old     mortality (&gt;30 days). For each coral with partial or whole colony     mortality, the cause of mortality was identified if possible. The     diagnosis included an assessment of the type of disease, the extent of     bleaching, predation, competition, or overgrowth, or other cause of     mortality. Each coral was first carefully examined to identify cryptic     predators such as snails (Coralliophila abbreviata) and fireworms     (<span style="font-style: italic;">Hermodice carunculata</span>).     Lesions were then diagnosed into four     ]]></body>
<body><![CDATA[categories: recent tissue loss, skeletal damage, color change, and     unusual growth patterns (an individual colony could have multiple     characteristics such as color change and recent tissue loss) and when     possible a field name was assigned. Diseases were identified according     to Bruckner 2010b and Raymundo <span style="font-style: italic;">et al.</span>     2008, and included yellow band     disease (YBD), white plague (WP), black band disease (BBD), red band     disease (RBD), Caribbean ciliate infection (CCI), dark spots disease     (DSD) and white band disease (WBD).</span></font><br      style="font-family: verdana;">     ]]></body>
<body><![CDATA[<br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Results</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;"><span      style="font-weight: bold;">Coral cover:</span> On most     of the reefs     examined in this study, between 5-15 m depth, coral cover was high (     40-60%;<a href="/img/revistas/rbt/v60s1/a05i2.jpg">Fig. 2a</a>). The     only exceptions were two sites on northern reefs,     ]]></body>
<body><![CDATA[Webers Joy/Witches Hut and Jeff Davis Memorial (cover= 30-35%), and in     certain locations with outbreaks of white plague. <span      style="font-style: italic;">Montastraea</span> annularis     (complex) were the dominant corals, in terms of living cover, occupying     approximately 20-25% of the benthos, and making up over 50% of the     total live coral cover. The next most common species, in terms of     living cover, where <span style="font-style: italic;">Agaricia</span>,     Madracis and <span style="font-style: italic;">Porites</span> spp     (<a href="/img/revistas/rbt/v60s1/a05i2.jpg">Fig. 2b</a>). Cover     of major functional groups of reef building corals showed slight     ]]></body>
<body><![CDATA[variations between sites and depths. For instance, cover of <span      style="font-style: italic;">M.     annularis</span> complex was lowest on northern reefs (pooled for all     depths;     22% vs 24%) while cover of <span style="font-style: italic;">Agaricia</span>     spp. was lowest on southern reefs     (6.6% vs 9%). Klein Bonaire also had a higher cover by <span      style="font-style: italic;">Madracis     mirabilis</span> (&gt;6%); this coral formed large thickets on several     reefs     ]]></body>
<body><![CDATA[that occasionaly extended the length of 10 m transects or more. There     were also differences in coral cover between depths. For instance,     <span style="font-style: italic;">Agaricia</span> spp. and <span      style="font-style: italic;">Eusmilia fastigiata</span> had the highest     cover on all     reefs at 15 m. In contrast,cover of <span style="font-style: italic;">Porites</span>     was higher at 10 m and 15 m     depth than at 5 m. <span style="font-style: italic;">Madracis</span>     spp. Was most variable, having the highest     cover at 5 m depth on northern and southern reefs, and 10 m depth on     ]]></body>
<body><![CDATA[Klein Bonaire. <span style="font-style: italic;">Acropora palmate</span>     and <span style="font-style: italic;">A. cervicornis</span> were     virtually     absent from all point intercept surveys, and only identified     infrequently in belt transects. Cover of macroalgae was relatively low     on all reefs, but was significantly higher on northern reefs (<a      href="/img/revistas/rbt/v60s1/a05i2.jpg">Fig. 2a</a>).     There was no correlation between coral cover and macroalgal cover     (r2=0.01, p=0.56). Cover of turf algae ranged from 7-38%, and was     significantly correlated to coral cover (r<sup>2</sup> = 0.44,     ]]></body>
<body><![CDATA[p=0.0003).</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-weight: bold; font-family: verdana;">Coral     composition:</span><span style="font-family: verdana;"> A total of 5957     corals, 4 cm or larger in diameter, were identified within belt     transects (10 m X 1 m) on 25 reefs in Bonaire (<a      href="/img/revistas/rbt/v60s1/a05i3.jpg">Fig. 3</a>). <span      style="font-style: italic;">M. annularis</span>     (complex) was the dominant functional group of corals at all sites     overall, in terms of numbers of colonies, making up approximately 27%     ]]></body>
<body><![CDATA[of all corals. <span style="font-style: italic;">M. annularis</span>     complex was numerically dominant between     5-10 m depth, while <span style="font-style: italic;">Agaricia</span>     was slightly more abundant at 15 m depth.     Reefs in the north and off Klein Bonaire had a higher proportion of <span      style="font-style: italic;">M.     annularis</span> (complex) colonies (30 and 29% respectively), when     compared     to reefs in the south (21%). When examined by species, <span      style="font-style: italic;">M. annularis</span> was     ]]></body>
<body><![CDATA[significantly more abundant than <span style="font-style: italic;">M.     faveolata </span>and <span style="font-style: italic;">M. franksi</span>     on     northern reefs and Klein Bonaire, but not southern reefs, while     abundance of <span style="font-style: italic;">M. faveolata</span> and     <span style="font-style: italic;">M. franksi</span> was very similar in     all     locations. The second most abundant functional group was the genus     <span style="font-style: italic;">Agaricia</span> (18-26% of all     corals). This genus was the dominant taxon on     ]]></body>
<body><![CDATA[southern reefs and the second most abundant taxon in other locations.     The genus <span style="font-style: italic;">Porites</span> was the     third most abundant taxon. While the     proportion (number of colonies) of brooding species (especially     <span style="font-style: italic;">Agaricia</span>, <span      style="font-style: italic;">Porites</span>) was very high, the     contribution to living coral     cover was less than <span style="font-style: italic;">M. annularis</span>     (complex) because these colonies were     smaller in size.    ]]></body>
<body><![CDATA[<br>     <br style="font-family: verdana;">     </span></font>     <font size="2"><span style="font-weight: bold; font-family: verdana;">Coral     size     structure: </span><span style="font-family: verdana;">Corals ranged in     size from 4 cm (smallest coral assessed in belt transects; 0-3 cm     corals assessed separately using quadrats and on exposed skeletal     surfaces) to over 450 cm diameter, with a maximum height of 460 cm. The     size structure of <span style="font-style: italic;">M. annularis</span>     ]]></body>
<body><![CDATA[(complex) shows a bell shaped     distribution with few small colonies (&lt;20 cm) and few very large     colonies (&gt;200 cm) and a large number of medium-sized corals (30-80     cm diameter); the population structure also exhibited a second peak for     colonies that were 150-199 cm diameter (<a      href="/img/revistas/rbt/v60s1/a05i4.jpg">Fig. 4a</a>). Colonies of     other     species (all species except <span style="font-style: italic;">M.     annularis</span> complex) were dominated by     very small colonies (&lt;20 cm) and populations in all locations (all     ]]></body>
<body><![CDATA[sites pooled, as well as northern, southern and Klein Bonaire reefs)     exhibited a monotonic decline in size with very few colonies over 60 cm     in diameter. Colonies of <span style="font-style: italic;">M. annularis</span>     (complex) were significantly     larger than all other species (mean diameter = 58 cm, versus 24 cm for     other species pooled; original diameter of the colony; <a      href="/img/revistas/rbt/v60s1/a05i4.jpg">Fig. 4b</a>),     although large (&gt; 1 m diameter) colonies of <span      style="font-style: italic;">Siderastrea siderea</span>,     <span style="font-style: italic;">Stephanocoenia intersepta,     ]]></body>
<body><![CDATA[Colpophyllia </span>natans and extensive (2-5 m     wide) thickets of <span style="font-style: italic;">Porites</span> <span      style="font-style: italic;">porites</span> and <span      style="font-style: italic;">Madracis mirabilis</span> were seen.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">There was a notable     absence of     smaller colonies (&lt;10 cm) of <span style="font-style: italic;">M.     annularis</span> (complex). It is important     ]]></body>
<body><![CDATA[to note that these represent measures of the diameter of the entire     corallum (the original skeletal surface area) and not the size of     tissue remnants on larger skeletal surfaces. Many colonies in the genus     <span style="font-style: italic;">Montastraea</span> that had     contiguous skeletons,1-3 m in diameter or larger,     were reduced in live tissue area, and individual corals often consisted     of multiple tissue remnants (mean = 6.6 remnants per colony) that were     reduced to a few cm in diameter.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     ]]></body>
<body><![CDATA[<font size="2"><span style="font-weight: bold; font-family: verdana;">Colony     mortality:</span><span style="font-family: verdana;"> The amount of     partial mortality     observed on corals located within belt transects varied from 0-99%,     with significant differences between species, colony sizes and     locations (<a href="/img/revistas/rbt/v60s1/a05i5.jpg">Fig. 5</a>). For     <span style="font-style: italic;">M. annularis</span>     complex (n=1602), a total of 73     (4.5%) had completely died, with surviving colonies (n=1529) missing a     mean of 28% of their tissue. Tissue loss for these species consisted of     ]]></body>
<body><![CDATA[25% old mortality and 3% transitional and recent mortality. When     examined by size, colonies of <span style="font-style: italic;">M.     annularis</span> (complex) with less than 30%     partial tissue loss were significantly smaller in size (mean diameter =     48 cm; mean tissue loss=11%; n=889) than colonies with 30-99% partial     tissue loss (mean diameter =61 cm; mean tissue loss= 50%; n=639).     However, a correlation analysis using the entire range of sizes (no     pooling into size classes) showed that tissue loss was not     significantly correlated with colony size. This may be due to the fact     that colonies exhibited a high range of tissue loss in all size     ]]></body>
<body><![CDATA[classes: each size class contained colonies with no mortality, moderate     levels of mortality and extensive mortality. Individual colonies of <span      style="font-style: italic;">M.     annularis</span> (complex) were also frequently divided into a number     of     smaller patches of live tissue; on average, each coral was subdivided     into 6.6 separate tissue remnants.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Tissue loss for     ]]></body>
<body><![CDATA[other corals (all     species except <span style="font-style: italic;">M. annularis</span>     complex) was significantly lower (mean     partial tissue loss=8%) and fewer dead colonies were identified (n=20,     0.4%). Interestingly, partial mortality for colonies that had colonized     reef substrates was higher than partial mortality for colonies that had     colonized exposed skeletal surfaces of living corals (9.4% vs 7.6%).     These corals were also less frequently subdivided into smaller tissue     remnants (mean=1.41 remnants/colony), possibly because they were     younger and smaller in size overall.</span></font><br     ]]></body>
<body><![CDATA[ style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Based on size     structure, abundance,     levels of recruitment, and coral condition, coral communities could be     divided into two primary groups, the <span style="font-style: italic;">M.     annularis</span> complex (<span style="font-style: italic;">M.     annularis</span>, <span style="font-style: italic;">M. faveolata</span>     and <span style="font-style: italic;">M. franksi</span>) and all other     species. Corals     ]]></body>
<body><![CDATA[lumped into &#8220;other species&#8221; were small to medium-sized (mean=24 cm),     and population structure exhibited a monotonic decline in size; most     colonies were &lt; 20 cm in diameter and very few colonies were over 60     cm. Although a small proportion of colonies showed active signs of     disease and competition from other biotic stressors, these corals had     low levels of partial mortality (8%), few completely dead colonies were     observed (0.4%), and they were the predominant species colonizing dead     skeletal surfaces of other corals as well as reef substrates.</span></font><br      style="font-family: verdana;">     <br style="font-weight: bold; font-family: verdana;">     ]]></body>
<body><![CDATA[<font size="2"><span style="font-weight: bold; font-family: verdana;">Recruits     on reef     substrate</span><span style="font-family: verdana;">: A total of 1688     quadrats, each 0.25 m<sup>2</sup>, were examined on 25 reefs in     Bonaire. Over 40%     of the quadrats contained at least one coral (0-3 cm in diameter,     classified here as a recruit). A higher proportion of quadrats on     southern reefs contained recruits (45% vs. 40% and 37% of quadrats on     northern reefs and Klein Bonaire, respectively). Individual quadrats     contained a maximum of 5 recruits (northern and southern reefs) and 8     ]]></body>
<body><![CDATA[recruits (Klein Bonaire) each. Eighteen different species of     scleractinian corals and two hydrozoan corals were observed in     quadrats. There was a notable absence of sexual recruits of <span      style="font-style: italic;">M.     annularis</span>, <span style="font-style: italic;">M. faveolata</span>     and <span style="font-style: italic;">M. franksi</span>, although     numerous tissue     remnants &lt;4 cm in diameter were noted. The dominant corals observed     as recruits included A. agaricites (mean = 3.9 recruits/</span></font><font      size="2"><span style="font-family: verdana;">m<sup>2</sup></span></font><font     ]]></body>
<body><![CDATA[ size="2"><span style="font-family: verdana;">), <span      style="font-style: italic;">P.     astreoides</span>(mean = 2.2 recruits/</span></font><font size="2"><span      style="font-family: verdana;">m<sup>2</sup></span></font><font size="2"><span      style="font-family: verdana;">), and <span style="font-style: italic;">Madracis</span>     spp (mean = 0.95     recruits/</span></font><font size="2"><span      style="font-family: verdana;">m<sup>2</sup></span></font><font size="2"><span      style="font-family: verdana;">) while all other species     were at densities of &lt;0.2/</span></font><font size="2"><span     ]]></body>
<body><![CDATA[ style="font-family: verdana;">m<sup>2</sup></span></font><font size="2"><span      style="font-family: verdana;">     (<a href="/img/revistas/rbt/v60s1/a05i6.jpg">Fig. 6a</a>). Species that     were common as adults within transects, but not     observed in quadrats included <span style="font-style: italic;">Mussa     angulosa</span>, <span style="font-style: italic;">Mycetophyllia     lamarckiana, M. aliciae, Dendrogyra cylindricus, Isophyllia sinuosa, I.     rigida, S. intersepta, Scolymia spp., Acropora palmata</span>, and <span      style="font-style: italic;">A.     cervicornis</span>.    ]]></body>
<body><![CDATA[<br> </span></font>    <br>     <font size="2"><span style="font-weight: bold; font-family: verdana;">Colonization     of     coral skeletal surfaces:</span><span style="font-family: verdana;"> The     exposed skeletal surfaces of 249 corals were colonized by new stony     corals. Corals that supported these settlers were missing a mean of 60%     of their tissue. Difference in partial mortality occurred between     regions, with colonies from southern reefs that were colonized by other     corals showing much higher amount of partial mortality overall. <span     ]]></body>
<body><![CDATA[ style="font-style: italic;">M.     annularis</span> (complex) colonies that supported settlers of other     species     were similar in size in all three locations, and they were     significantly larger than all other species that were colonized by new     corals (<a href="/img/revistas/rbt/v60s1/a05t2.gif">Table 2</a>).</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">A total of 12     species of corals     ]]></body>
<body><![CDATA[supported colonizers <a href="/img/revistas/rbt/v60s1/a05i7.jpg">(Fig.     7</a>), although most were observed on <span      style="font-style: italic;">M.     annularis</span> (36%) and <span style="font-style: italic;">M.     faveolata</span> (35%). A much higher proportion of <span      style="font-style: italic;">M.     annularis</span> (complex) skeletons on Klein Bonaire (19%) were     colonized by     corals as compared to northern (13%) and southern (5.3%) reefs. Exposed     skeletal surfaces of other species were less frequently colonized by     ]]></body>
<body><![CDATA[new corals, with exception of <span style="font-style: italic;">M.     cavernosa </span>and <span style="font-style: italic;">S. siderea</span>     on southern     reefs (<a href="/img/revistas/rbt/v60s1/a05i4.jpg">Fig. 4</a>). No     differences in the number of settlers per unit area     were noted between reef substratum and exposed <span      style="font-style: italic;">M. annularis</span> skeletal     patches.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Overall, 825 corals     ]]></body>
<body><![CDATA[of 16 species     were identified as colonizers on these corals, with up to 12 observed     on a single colony. These settlers were up to 30 cm in diameter, with     most (49%) from 4-7 cm in diameter and &lt;10% that were 3 cm or     smaller. <span style="font-style: italic;">Agaricia</span> agaricites     (43%) and <span style="font-style: italic;">P. astreoides</span> (27%)     were the     most common colonizers, although broadcast spawners were also observed     (<a href="/img/revistas/rbt/v60s1/a05i6.jpg">Fig. 6b</a>).     Interestingly, some species observed as recruits were not     ]]></body>
<body><![CDATA[observed to settle on dead skeletons (S. siderea). The proportion of     colonizers also differed significantly from the proportion of recruits     observed on the reef substrate among some species (e.g. fewer <span      style="font-style: italic;">M.     decactis</span> and higher percentage of colonizers of <span      style="font-style: italic;">E. fastigiata, C.     natans, Diploria spp., M. cavernosa, P. Porites, M. meandrites, </span>and     <span style="font-style: italic;">S.     interepta</span>), but not all species (<span      style="font-style: italic;">Agaricia</span> and <span     ]]></body>
<body><![CDATA[ style="font-style: italic;">P. astreoides</span>). There was     also a notable absence of <span style="font-style: italic;">M.     annularis</span> (complex) recruits and     colonizers on dead skeletons. While <span style="font-style: italic;">M.     annularis</span> (complex) was not     observed recruiting onto any exposed skeletal surfaces, juvenile corals     (4 cm or larger) that had settled on dead coral surfaces represented     17.5% of all corals of other species (all species except <span      style="font-style: italic;">M. annularis</span>)     identified within belt transects.</span></font><br     ]]></body>
<body><![CDATA[ style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Discussion</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Assessment protocols     for stony     corals frequently rely on single or repeat assessments of coral cover     as the primary metric to characterize reef condition and gauge changes.</span></font><br      style="font-family: verdana;">     ]]></body>
<body><![CDATA[<br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">This approach     assumes that reefs     with high coral cover are in better shape and exhibit higher resilience     (Gardner <span style="font-style: italic;">et al.</span> 2003, Bruno     &amp; Selig 2007), yet coral cover may     actually be one of the last metrics to indicate ecosystem failure     (Bellwood <span style="font-style: italic;">et al.</span> 2004,     McClanahan <span style="font-style: italic;">et al.</span> 2011). A     second coral metric     ]]></body>
<body><![CDATA[that has received greater attention in recent years is an assessment of     recruitment, whereas high levels of recruitment may suggest a reef is     rebounding after a disturbance (Mumby &amp; Harborne 2010). In     addition, studies characterizing impacts, such as coral diseases,     usually rely on a count the number of colonies in a given area to     provide some indication of prevalence or incidence of the particular     condition (Raymundo <span style="font-style: italic;">et al.</span>     2008). These parameters alone may fail to     provide a reliable measure of reef resilience because they fail to take     into account factors affecting the fitness and dynamics of coral     ]]></body>
<body><![CDATA[populations. Namely, corals are modular (clonal) organisms can undergo     growth, shrinkage, fission into several ramets, and fusion; subunits     can function independently and they exhibit indeterminate growth     (Babcock 1991).</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Two of the most     important parameter     to consider when assessing resilience of coral populations is size and     amount of partial mortality, as mortality and fecundity rates in corals     are strongly size-dependent (Harrison &amp; Wallace 1990). Smaller     ]]></body>
<body><![CDATA[corals are generally more vulnerable to stressors, while the likelihood     of total colony mortality decreases with increasing colony size     (Babcock &amp; Mundy 1996, Hall &amp; Hughes 1996). Corals also show a     positive relationship between colony size and fecundity, with smaller     colonies allocating more energy to non-reproductive life history traits     such as growth and maintenance and focusing on reproduction after     achieving a critical threshold size (Szmant-Froelich 1985).     Reproductively mature colonies may also regress in size below that     minimum threshold, becoming non reproductive (Szmant 1991). In     addition, competitive abilities and regenerative potential also     ]]></body>
<body><![CDATA[increases with size (Meesters <span style="font-style: italic;">et al.</span>     1994).</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Since colony size     can influence     patterns of mortality and fecundity, population size frequency     distributions provide insight into the effects of disturbance and     population processes. Coral populations are normally highly positively     skewed, with a dominance by the smallest size classes and an     exponential decrease with increasing colony size (Bak &amp; Meesters     ]]></body>
<body><![CDATA[1998, 1999). Larger colonies typically become rarer in a population,     but they have a decreased probably of total colony mortality than     smaller colonies (Hughes &amp; Jackson 1985, Soong &amp; Lang 1992).     Furthermore, larger colonies show a lower frequency of partial and     whole colony mortality, with mortality decreasing in relation to colony     size (Meesters <span style="font-style: italic;">et al.</span> 1994).     One consequence of this is that smaller     colonies suffer total mortality more frequently than larger colonies,     while larger colonies sustain higher levels of partial mortality over     multiple disturbances, but have a larger chance of survival (Soong     ]]></body>
<body><![CDATA[1993). Thus, size frequency distributions of coral populations provide     a sensitive means of discriminating changes in coral communities in     response to acute and chronic disturbances, and may help identify     differences between populations exposed to differing degree of     environmental stressors.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Scleractinian coral     populations     normally exhibit a positively-skewed (left) size frequency distribution     with populations dominated by smaller colonies. On a Caribbean     ]]></body>
<body><![CDATA[<span style="font-style: italic;">Montastraea</span> reef, a population     that has not been exposed to a major     disturbance for several decades may progressively exhibit a shift     towards the opposite extreme, with a dominance of&nbsp; extremely large     colonies (negatively-skewed right). In Bonaire, a northern reef (Taylor     Made) with a higher coral cover than all other sites examined in this     study was dominated by extremely large colonies of <span      style="font-style: italic;">Montastraea</span>     faveolata and <span style="font-style: italic;">M. annularis</span>,     many over 200 cm in diameter and 5 m in     ]]></body>
<body><![CDATA[height. This site had few small corals and colonies exhibited little     partial mortality, suggesting an absence of a major acute disturbance     for several decades and minimal chronic impacts from disease or other     stressors. This reef appears to be in a stable equilibrium at this     time. Nevertheless, this site may be pushed over the tipping point     towards a trajectory of coral decline by an acute disturbance (e.g. an     outbreak of white plague), as it exhibited low coral diversity, low     levels of recruitment ,and few juvenile corals. However, the site may     also undergo rapid recovery if other resilience factors are present,     such as high rates of herbivory, as recruitment may increase once     ]]></body>
<body><![CDATA[substratum becomes available.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The demographic     structure of a     coral population also illustrates the presence of past disturbances,     where a population dominated by small size classes may indicate high     mortality in intermediate and larger corals (Nystrom <span      style="font-style: italic;">et al.</span> 2008).     Several reefs at the southern end of Bonaire had high coral cover, but     ]]></body>
<body><![CDATA[they were dominated by a high diversity of small corals, most of which     were 4-20 cm diameter. These reefs included a high proportion brooding     species such as <span style="font-style: italic;">Agaricia</span> and <span      style="font-style: italic;">Porites</span>, although various brain     corals,     flower coral, cactus corals and many other species were present. Most     <span style="font-style: italic;">Montastraea</span> colonies were     small (&lt;90 cm diameter), many dead     standing colonies of these species were observed, and colonies were     frequently subdivided into small tissue remnants. Although high numbers     ]]></body>
<body><![CDATA[of recruits and juvenile corals were present, no <span      style="font-style: italic;">Montastraea</span> colonies     below 10 cm diameter were observed. The declining condition of <span      style="font-style: italic;">M.     annularis</span> is indicative of a past disturbance, as well as     chronic     tissue loss from disease. While coral cover is rebounding, the     progressive replacement of <span style="font-style: italic;">M.     annularis</span> may be indicative of lowered     resilience as the community is becoming dominated by smaller,     ]]></body>
<body><![CDATA[shorter-lived species that are highly susceptible to future     perturbations.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">By subdividing     mortality into three     categories, recent, transitional and old mortality, the cause of tissue     loss and the timing of a disturbance event may be discernable(Lang     2003). The presence of high levels of recent mortality suggests that a     disturbance has occurred and the event is ongoing. Sites containing     corals with extensive transitional mortality and little recent     ]]></body>
<body><![CDATA[mortality were affected by a disturbance in the recent past, but the     event has passed and the system may be at the early stages of recovery.     At the opposite extreme, if most colonies have extensive patches of old     mortality, and little or no recent mortality, it is apparent that the     site was impacted at some time in the past, but the source of mortality     is gone making it difficult to determine when the mortality occurred,     or whether it was an acute event or a chronic disturbance. In Bonaire,     extent of partial and whole colony mortality was notably different     among reefs, with southern reefs showing low levelsof old mortality and     the highest amount of recent and transitional mortality. Recent     ]]></body>
<body><![CDATA[mortality was attributed to an outbreak of white plague; this disease     was also present in other locations, but at a lower prevalence.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The challenge faced     when assessing     colony size and extent of mortality through a single rapid assessment     is that it is impossible to determine the growth of a coral population     over time. Because corals are clonal animals, they can progressively     increase in size with age, theoretically with indeterminate growth, but     ]]></body>
<body><![CDATA[they can also shrink in size, without dying (Babcock 1991). Through     partial mortality colonies are frequently subdivided into isolated     tissue remnants, and the original colony boundaries can become obscured     by other organisms, especially on reefs with a high cover of macroalgae     or other epibionts. A dominanceof small colonies may represent several     successful recruitment events, or the small colonies may be surviving     remnants of formerly larger corals. A feasible way to differentiate     juvenile corals from older surviving remnants, without having to tag     individual colonies and return to the site to look at survival over     time, is to separate out coral measurements into two categories: those     ]]></body>
<body><![CDATA[corals found on the reef substrate, and those that have colonized     exposed skeletal surfaces of corals with partial or total mortality.     All corals that settled onto exposed skeletal surfaces or dead coral     skeletons can be considered recruits and not remnants, which is not the     case for colonies occurring on the reef substratum. In contrast, small     patches of tissue of the same species, that are similar in morphology     and coloration to surrounding tissue are likely to be tissue remnants.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">In Bonaire, corals     ]]></body>
<body><![CDATA[frequently     settled on most species of massive and plating corals, although the     highest settlement and survival rates appear to be on Montastraea     skeletons. Settlers included 16 important reef-building species, with a     notable absence of <span style="font-style: italic;">Montastraea     annularis</span> (complex). The majority of     these corals were completely alive, unlike many of the similar sized     corals that occurred on the reef substrate. There were however, no     differences noted in the number of recruits recorded on coral skeletons     of <span style="font-style: italic;">M. annularis</span>, versus the     ]]></body>
<body><![CDATA[reef platform. While the two substrates are     equally attractive to settling larvae, dead skeletal surfaces of     <span style="font-style: italic;">Montastraea</span> may be optimal,     due to high rates of survival and growth     into larger size classes (and absence of partial mortality as observed     among the same species on reef substratum). Because the settlement     surface (coral skeleton) is raised off the bottom, settlers are less     affected by sediment transport and siltation, macroalgal competition,     and possibly disease. Nevertheless, one species (<span      style="font-style: italic;">Siderastrea siderea</span>)     ]]></body>
<body><![CDATA[recruited onto the reef, but it did not colonize coral skeleton. The     proportion of colonizers on skeletons that survived to larger size     classes also differed among species, indicating that high recruitment     does not necessarily equate to high resilience.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The discrimination     of corals     settling onto skeletal surfaces of other corals provides a useful     metric when using a single rapid assessment to determine levels of     ]]></body>
<body><![CDATA[recruitment, as well as the potential for longer-term survival and     growth. This is not be possible when examining coral population     dynamics based solely on colonies on the reef substrate, as large     corals that undergo shrinkage and fission may be misinterpreted as     juveniles (smaller size classes). One complication with this measure is     an absence of information on the age of the coral skeleton necessary to     attract settling larvae. Corals did settle on exposed skeletal patches     of colonies of <span style="font-style: italic;">M. annularis</span>     (complex) exhibiting slow, chronic     mortality from yellow band disease (e.g. areas that were denuded 30-90     ]]></body>
<body><![CDATA[days earlier; Bruckner, unpubl data), suggesting coral skeleton of this     species becomes suitable for settlement relatively early. However, for     other species only long dead skeletal patches, with an absence of     macroalgae and other prominent epibionts, appeared to support coral     settlers. Although it is not possible to determine the age of the dead     skeleton, it was certainly many months to years, as evidenced by the     presence of turf algae, crustose coralline algae, and encrusting     invertebrates.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The results     ]]></body>
<body><![CDATA[presented here provide     an indication of the resilience of of coral populations in Bonaire. The     presence of high levels of recent recruitment and growth of recruits     into larger size classes demonstrates that newly settling corals are     surviving and contributing to an increase in the proportion of these     taxa. The absence of larger size classes of some coral taxa that     colonized exposed skeletal surfaces suggest that certain species are     recruiting onto these reefs at levels that exceed survival. In     addition, the dominant frame-builder (<span style="font-style: italic;">M.     annularis</span> complex) on these     ]]></body>
<body><![CDATA[reefs appears to be highly vulnerable to recent disturbances, as     populations of these species are being progressively reduced in     abundance and size, and they have not shown substantial levels of     recruitment needed to replace colonies that died. As observed in other     locations throughout the Caribbean, these reefs are undergoing a     transition from a <span style="font-style: italic;">Montastraea</span>-dominated     system to a community     consisting predominantly of other species. Fortunately for Bonaire,     these reefs still have unusually high coral cover, high levels of     recruitment and good survival of juvenile corals, and several sites     ]]></body>
<body><![CDATA[contain a high abundance of large, unblemished colonies of <span      style="font-style: italic;">Montastraea     annularis</span> (complex), all which are important indicators of     resilience.</span></font><br style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">While single     assessments will never     provide the kind of data that would result from repeated visits to a     site over time, single rapid assessments can provide valuable data on     the resilience of coral populations. For corals, these assessments must     ]]></body>
<body><![CDATA[expand upon traditional measures of coral cover and abundance, by     incorporating data on recruitment, size structure, partial and whole     colony mortality, and the extent of survival and growth of recruits.</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">Acknowledgements</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">The intensive     surveys completed In     ]]></body>
<body><![CDATA[Bonaire between July 19-26, 2010 represent the dedicated efforts of a     talented group of scientists and field assistants. I am grateful for     the assistance and expertise provided by the team to complete rapid     ecological assessments, and extensive time devoted to data entry, with     special thanks to Eric Borneman, Robin Bruckner, Kalisi Faanunu, Philip     Renaud, Glynnis Roberts, Debbie Santavy and Amanda Williams. Al     Catafulmo and the Black Durgon Inn graciously accommodated the research     team during this mission. I also thank the Government of Bonaire and     the Bonaire Marine Park for assistance with permits and other technical     aspects associated with the work. All funding for this work was     ]]></body>
<body><![CDATA[provided by the Khaled bin Sultan Living Oceans Foundation. Surveys     were performed under a research permit #30001380 granted by the Island     Council of the Island Territory of Bonaire.</span></font><br      style="font-family: verdana;">     <hr style="width: 100%; height: 2px;"><br style="font-family: verdana;">     <font size="3"><span style="font-weight: bold; font-family: verdana;">References</span></font><br      style="font-family: verdana;">     <br style="font-family: verdana;">     <font size="2"><span style="font-family: verdana;">Almany, G.R., M.L.     Berumen, S.R.     ]]></body>
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